Get Ready
Exercises in R will be a central part of the workshop. Make sure a more recent version of R and RStudio is running on your computer. The following R packages are essential. There will be more libraries but this is a starting point. For installation support and ideas see R Help.
CRAN Packages¶
- ape - Analyses of Phylogenetics and Evolution
- DT - A Wrapper of the JavaScript Library DataTables
- gridExtra - Arrange Multiple Grid-Based Plots
- Hmisc - Harrell Miscellaneous
- igraph - Pain-Free Implementation of Graph Algorithms
- iml - Tools for Analysing Machine Learning Models
- pander - Rendering R Objects into Pandocs Markdown
- plotly - Advanced Scatter and Line Plots
- plyr - Splitting, Applying and Combining
- randomForest - Random Forests for Classification and Regression
- ranger - Fast Implementation of Random Forests
- sciplot - Scientific Graphing Functions for Factorial Designs
- Tidyverse - Collection of R Packages, including ggplot2, dplyr, etc.
- vegan - Community Ecology Package